Invest Clin 66(4): 365 - 377, 2025 https://doi.org/10.54817/IC.v66n4a02
Corresponding author. Rong Chen. Department of Medical Laboratory, The First People’s Hospital of Shuangliu
District/West China (Airport) Hospital Sichuan University, No. 120, Chengbei Upper Street, Dongsheng Street,
Shuangliu District, Chengdu, 610200,China. Tel: +86 13736798579. Email: chenrong202431@126.com
CircRNA_104293 targets miR-497-5p to
inhibit the mTOR/STAT3 pathway and
mitigate inflammation in Crohn’s disease.
Xuerui Yin, Gaigai Huang, Chuan Zheng, Yu Zhou and Rong Chen
Department of Medical Laboratory, The First People’s Hospital of Shuangliu District/
West China (Airport) Hospital Sichuan University, Chengdu, China.
Keywords: Crohn Disease; mTOR/STAT3; Inflammation; circRNA_104293; miR-497-5p.
Abstract. Crohn’s disease (CD) is a chronic inflammatory bowel disease
driven in part by dysregulation of the mTOR/STAT3 signaling pathway, where
mTOR activates STAT3 via the PI3K/AKT cascade. Circular RNAs (circRNAs)
have recently emerged as essential regulators in inflammatory processes, al-
though their specific roles in CD remain largely unexplored. In this study, cir-
cRNA expression profiles from CD patients and healthy controls were analyzed,
revealing a significant upregulation of circRNA_104293 in CD tissues. Function-
al investigations demonstrated that knockdown of circRNA_104293 reduced in-
flammatory cytokine production and DNA damage markers, and decreased cell
apoptosis. Bioinformatic analysis and experimental validation confirmed a di-
rect interaction between circRNA_104293 and miR-497-5p. Furthermore, miR-
497-5p inhibition reversed the anti-inflammatory effects of circRNA_104293 si-
lencing. Notably, both rapamycin (an mTOR inhibitor) and miR-497-5p mimics
suppressed the mTOR/STAT3 pathway and alleviated inflammatory responses.
These findings suggest that the circRNA_104293/miR-497-5p axis contributes
to CD progression by modulating the mTOR/STAT3 pathway, highlighting its
potential as a novel therapeutic target for the treatment of Crohn’s disease.
366 Yin et al.
Investigación Clínica 66(4): 2025
CircRNA_104293 actúa sobre el miR-497-5p para inhibir
la vía mTOR/STAT3 y mitigar la inflamación en la enfermedad
de Crohn.
Invest Clin 2025; 66 (4): 365 – 377
Palabras clave: Enfermedad de Crohn; mTOR/STAT3; Inflamación; circRNA_104293;
miR-497-5p.
Resumen. La enfermedad de Crohn (CD) es una enfermedad inflamatoria
crónica del intestino cuya progresión está parcialmente mediada por la disfun-
ción de la vía de señalización mTOR/STAT3, en la que mTOR activa a STAT3
a través de la cascada PI3K/AKT. Recientemente, los ARN circulares (circR-
NAs) han surgido como reguladores clave en procesos inflamatorios, aunque
sus funciones específicas en la CD aún no están bien definidas. En este estu-
dio se analizaron los perfiles de expresión de circRNAs en pacientes con CD y
en controles sanos, y se identificó una sobreexpresión significativa de circR-
NA_104293 en tejidos de pacientes con CD. Los análisis funcionales mostraron
que la reducción de la expresión de circRNA_104293 disminuyó la producción
de citocinas inflamatorias y de marcadores de daño al ADN, así como la apopto-
sis celular. Mediante análisis bioinformático y validación experimental, se con-
firmó una interacción directa entre circRNA_104293 y miR-497-5p. Además, la
inhibición de miR-497-5p revirtió los efectos antiinflamatorios inducidos por
el silenciamiento de circRNA_104293. De manera destacada, tanto la rapami-
cina (un inhibidor de mTOR) como los miméticos de miR-497-5p suprimieron
la activación de la vía mTOR/STAT3 y redujeron las respuestas inflamatorias.
Estos hallazgos indican que el eje circRNA_104293/miR-497-5p participa en
la progresión de la CD mediante la modulación de la vía mTOR/STAT3, lo que
resalta su potencial como nuevo objetivo terapéutico para el tratamiento de la
enfermedad de Crohn.
Received: 19-06-2025 Accepted: 17-09-2025
INTRODUCTION
Crohn’s Disease (CD) is characterized
by chronic, repetitive inflammation of the
gastrointestinal tract. Its etiology has not
been fully clarified, but studies have shown
that CD is closely associated with genetic,
environmental, and immune factors, as well
as changes in the gut microbiota¹.
Patients
often present with abdominal pain, diarrhea,
weight loss, fever, and other symptoms,
which in severe cases can lead to complica-
tions such as intestinal obstruction and fis-
tula formation 1, 2. The mammalian target
of rapamycin (mTOR) belongs to the phos-
phoinositide 3-kinase (PI3K)-related kinase
family and is mainly involved in processes
such as cell growth, proliferation, metabo-
lism, and autophagy 3. Signal transducer and
activator of transcription 3 (STAT3) is a tran-
scription factor that regulates cell survival,
proliferation, and immune responses. In CD,
aberrant activation of STAT3 is strongly as-
sociated with exacerbated inflammatory
responses 4. The mTOR/STAT3 pathway in-
teracts in CD to co-regulate inflammatory
The role of CircRNA104293 in Crohn’s disease 367
Vol. 66(4): 365 - 377, 2025
reactions. For example, mTOR activation has
been found to promote STAT3 phosphoryla-
tion through the phosphoinositide 3-kinase/
protein kinase B (PI3K/AKT) signaling path-
way, thereby enhancing its transcriptional
activity 5. This interaction plays a key role
in intestinal inflammation in Crohn’s dis-
ease patients and may lead to its persistence
and aggravation. But the specific molecular
mechanism is unknown.
Circular RNAs (circRNAs) are mole-
cules with unique circular structures that
play an essential role in a variety of dis-
eases 6, 7. In neurological diseases, circRNA
is widely expressed in brain tissue and is
closely related to neurodevelopment and
signaling, showing abnormal expression in
diseases such as cerebral palsy and stroke,
and is considered a potential biomarker
of neurological diseases due to its stable
structure 8,9. In malignant tumors, some
circRNAs can adsorb microRNAs (miRNAs)
as “molecular sponges”, thereby relieving
miRNA inhibition of oncogenes and promot-
ing tumor development 10. In CD, circRNA
103765 is reported to regulate disease pro-
gression 11. At present, the study of circRNA
in CD still needs to be further expanded to
fully understand its effects on CD. MicroR-
NAs (miRNAs) are also closely associated
with the progression of various inflamma-
tory diseases 12, 13. miR-497 has been report-
ed to influence the progression of associ-
ated inflammatory diseases by modulating
lipopolysaccharide (LPS) -induced inflam-
mation in vivo 14, 15. Furthermore, miR-497
expression was significantly decreased fol-
lowing LPS treatment of RAW264.7 cells
and in a mouse colitis model 16.
Here, we performed sequencing analy-
sis of circRNA expression profiles from CD
patients to explore potential therapeutic
targets and their molecular mechanisms.
Through screening, we found circRNAs that
were up- and down-regulated in CD. Further,
qPCR was used to detect the expression level
of circRNA 104293 in CD patients, and its
mechanism of action in CD development was
studied in depth. The results of this study
are expected to provide a new treatment op-
tion for patients with CD.
METHODS
Patients and genome sequencing analysis
Between June 2021 and March 2022,
we collected the inflamed colonic tissue
samples from CD patients who underwent
surgical treatment at our institution. The
tissues were obtained from inflamed areas
of the colon, confirmed by intraoperative
findings and postoperative histopathologi-
cal examination, and non-inflamed adjacent
tissues served as control. Tissue total RNA
isolation kit (RC101-01, Vazyme, Nanjing,
China) was used for the RNA extraction,
and RNA integrity was assessed using an
Agilent 2100 Bioanalyzer (Agilent Tech-
nologies, USA). High-throughput circRNA
microarray analysis was conducted by Ak-
somics Biotechnology (Shanghai, China).
Sample processing was carried out ac-
cording to the manufacturer’s protocol.
Briefly, the Seq-Star™ rRNA removal kit
(AS-MB-001, Aksomics) was employed for
the rRNA removal, and the circRNA purifi-
cation and fluorescent cRNA transcription
were performed using Seq-Star™ RNAClean
and smallEnrich Beads (AS-MB-009) and
rtStar™ First-Strand cDNA Synthesis Kit
(AS-FS-001) from Aksomics. Labeled cRNA
concentration and specific activity were de-
termined using a NanoDrop ND-1000 spec-
trophotometer (Thermo Fisher Scientific,
USA). One microgram of labeled cRNA from
each sample was fragmented, mixed with
hybridization buffer, and loaded onto a Hu-
man circular RNA Array V2.0 (8 × 15K for-
mat, Aksomics). Hybridization was carried
out at 65°C for 17 h in an Agilent Hybridiza-
tion Oven (model G2545A). After hybridiza-
tion, the microarrays were washed and fixed
with Gene Expression Wash Buffers (Agi-
lent Technologies, USA) and scanned with
an Agilent DNA Microarray Scanner (model
G2505C).
368 Yin et al.
Investigación Clínica 66(4): 2025
Differential expression analysis
Differential expression analysis was
conducted using the DESeq2 R package.
The fold change and statistical significance
were calculated based on the log2|(fold
change)|>1 and p-adjust <0.05.
Cells culture and treatment
In this study, Fetal Human Colon (FHC)
cells (normal human colon epithelial cells)
were purchased from the Cell Bank of Shang-
hai Institute of Life Sciences. Cells were cul-
tured in RPMI 1640 medium containing 10%
fetal bovine serum (FBS) and 1% penicillin-
streptomycin-glutamine (PSG) and adapted
for 2-3 days before use in experiments. To in-
duce a general inflammatory response in vi-
tro, FHC cells were treated with 500 ng/mL
of lipopolysaccharide (LPS) and control cells
were treated with serum-free medium. Treat-
ed cells were divided into two groups: small
interfering RNA (si)-circRNA group and neg-
ative control group (siNC). Cells were trans-
fected using Lipofectamine ™ 2000 follow-
ing kit instructions and cells were collected
48 hours later for subsequent experiments.
In addition, inhibitors of miR-497-5p and its
negative control (NC) were transfected us-
ing Lipofectamine ™ 2000. The mTOR tar-
geting inhibitor rapamycin (Bioengineering
Co., A606203) was used for experiments and
cells were co-incubated with 100 ng/mL ra-
pamycin to investigate its effect.
Q-PCR assay
To determine the expression levels of
miR-497-5p and circRNA 104293, we used
qPCR. TRIZOL reagent (R0016, Beyotime,
Shanghai, China) was used to extract total
RNA and RNA was isolated through cen-
trifugation. The RNA was then dissolved in
RNase-free water. Then reverse transcrip-
tion was performed to synthesize cDNA us-
ing BeyoRT™II First Strand cDNA Synthesis
Kit (D7168S, Beyotime, Shanghai, China),
which was subsequently used as the tem-
plate for qPCR amplification following the
instructions of the SYBR Green kit (D7260,
Beyotime). The qPCR cycling conditions in-
cluded initial denaturation at 95°C for 30s,
followed by 39 cycles of 95°C for 5s, 60°C
for 30s, and a final extension at 72°C for 5
seconds. The relative expression levels of cir-
cRNA_104293 were normalized to GAPDH
as an internal control. Gene expression was
calculated using the 2-ΔΔCt method.
ELISA assay
After transfection, the cells were
washed three times with PBS. Subsequently,
0.5 ml of non-denaturing protein lysis buf-
fer was added to each well and gently mixed
to lyse the cells. The lysates were then incu-
bated on ice for 20 minutes. The superna-
tants were immediately stored at -20°C. The
tumor necrosis factor-alpha (TNF-α) ELISA
Kit (PT518), interleukin-1 beta (IL-1β)
ELISA Kit (PI305), IL-6 ELISA Kit (PI325)
and IL-8 ELISA Kit (PI641) were purchased
from the Beyotime biotechnology company
(Shanghai, China). The levels of inflamma-
tory cytokines in cell lysates were measured
using ELISA assays according to the manu-
facturer’s instructions.
Flow cytometry assay
A cell suspension of LPS-treated cells
was prepared at a density of 5 × 105/mL and
seeded into a 6-well plate. After 24 hours,
the cells were transfected with si-circRNA
104293, or si-NC, followed by an additional
24-hour incubation. Post-transfection, the
cells were harvested through digestion and
centrifugation, then washed three times
with ice-cold PBS. Apoptosis was assessed
by staining the cells with 5 μL of Annexin V-
FITC/PI. The apoptosis rate was subsequent-
ly quantified using flow cytometry. This pro-
tocol ensured consistent evaluation of cell
viability under experimental conditions.
Dual-luciferase reporter gene assay
The TargetScan online tool was em-
ployed to predict potential miRNA bind-
ing sites on circRNA_104293, specifically
identifying complementary sequences for
The role of CircRNA104293 in Crohn’s disease 369
Vol. 66(4): 365 - 377, 2025
miR-497-5p. To validate this interaction,
wild-type or mutant circRNA_104293 plas-
mids were constructed by GenePharma
(Shanghai, China). The miR-497-5p mimic
or negative control was co-transfected with
either wild-type or mutant plasmids into
FHC cells using Lipofectamine™ 2000 (In-
vitrogen, USA), with triplicate wells for each
condition. After 24 h of post-transfection,
the medium was discarded, and the cells
were washed three times with PBS. Cell lysis
was performed using 100 μL of lysis buffer
(RG132S, Beyotime) at room temperature.
Firefly and Renilla luciferase activities were
measured sequentially using a Dual-Lucifer-
ase® Reporter Assay System (E1910, Pro-
mega, USA), including LARII reagent and
Stop&Glo® reagent, according to the man-
ufacturer’s instructions. Luminescence was
detected using a Glomax Multi+ Detection
System (Promega, USA).
Immunofluorescence assay
Cells were cultured on sterile glass cov-
erslips in 24-well plates and then treated
with si-circRNA 104293 as the test and si-
NC as the control. After treatment, the cov-
erslips were washed three times with PBS
and fixed with 37 g/L formaldehyde for 15
min. Permeabilization was performed using
0.5% Triton X-100 for 10 min, followed by
blocking with 100 mL/L bovine serum al-
bumin (BSA) for one h. Primary antibodies
specific to dsDNA (ab27156, Abcam) and
ssDNA (CBL407, Millipore) were applied at
appropriate dilutions, and the samples were
incubated overnight at 4°C. The coverslips
were then washed three times with PBS and
once with distilled water, then incubated
with an FITC-conjugated secondary antibody
(A-11001, Thermo Fisher Scientific) for one
h at room temperature in the dark. Finally,
the samples were mounted with glycerol and
analyzed using fluorescence microscopy. Flu-
orescence intensity was quantified in ImageJ
by measuring the mean fluorescence per cell
and normalizing to control samples.
Western blot assay
Proteins were extracted from treated
cells 48 h post-treatment using RIPA ly-
sis buffer supplemented with protease and
phosphatase inhibitors. The protein samples
were quantified using a BCA protein assay
kit (A65453, Thermo Fisher Scientific), and
equal amounts of protein (30 μg/lane) were
separated on an SDS-PAGE gel and subse-
quently transferred to a PVDF membrane.
And then the membrane was blocked with
5% skim milk in TBST for one hour. After
blocking, the membrane was incubated over-
night at 4°C with primary antibodies tar-
geting p-mTOR (ab109268, Abcam) and p-
STAT3 (ab76315, Abcam). GAPDH (ab8245,
Abcam) was used as the loading control. Fol-
lowing three washes with TBST, the sections
were incubated with appropriate HRP-con-
jugated secondary antibodies (ab205719,
Abcam). After additional TBST washes, the
membrane was treated with a chemiluminis-
cent substrate (ab5801, Abcam), and pro-
tein bands were visualized using a Fusion
Fx5 chemiluminescence detector (Vilber).
Statistical analysis
The data were processed using SPSS
21.0 software and R software (version 4.2.0).
Differences between the two groups were
evaluated using the independent samples t-
test. A one-way ANOVA followed by the SNK-
q test was used to compare multiple groups.
A p<0.05 was statistically significant.
RESULTS
CircRNA_104293 was upregulated
in CD patients
To identify differentially expressed cir-
cRNAs between the control and CD groups,
genome-wide sequencing analysis was per-
formed. A total of 415 up-regulated and 234
down-regulated circRNAs were identified
(Fig. 1A). Among these, circRNA_103765
exhibited significantly elevated expression,
highlighting its potential as a therapeutic
370 Yin et al.
Investigación Clínica 66(4): 2025
target for CD. Further validation was con-
ducted in LPS-treated FHC cells, where cir-
cRNA_104293 showed significantly higher
expression than in controls (Fig. 1B). This
finding underscores its potential role in in-
flammatory conditions.
Si-circRNA_104293 suppressed
inflammation levels.
The transfection efficiency of si-cir-
cRNA_104293 and si-NC was evaluated
using q-PCR. Results demonstrated that
si-circRNA_104293 effectively reduced cir-
cRNA_104293 expression in LPS-treated
FHC cells, confirming successful transfec-
tion (Fig. 2A). To assess the impact of si-cir-
cRNA_104293 on inflammation, ELISA was
performed, revealing a significant decrease
in pro-inflammatory cytokines TNF-α, IL-
1β, IL-6, and IL-8 (Fig. 2B). These findings
suggest that si-circRNA_104293 effectively
attenuates inflammatory responses. Addi-
tionally, flow cytometry indicated that si-cir-
cRNA_104293 markedly inhibited apoptosis
in LPS-treated FHC cells (Fig. 2C), further
supporting its role in mitigating cellular
damage under inflammatory conditions.
CircRNA_104293 targeted miR-497-5p
TargetScan was used to identify the in-
teraction between circRNA_104293 and miR-
497-5p (Fig. 3A). A dual luciferase reporter
assay confirmed this binding relationship,
showing that the miR-497-5p mimic reduced
luciferase activity in the circRNA_104293-
WT group (Fig. 3B). This indicated that
circRNA_104293 directly targets and nega-
tively regulates miR-497-5p. Further valida-
tion using q-PCR revealed that miR-497-5p
expression was lower in the LPS-treated
group compared to controls (Fig. 3C). Ad-
ditionally, silencing circRNA_104293 led to
a notable increase in miR-497-5p levels (Fig.
3D), further supporting the regulatory role
of circRNA_104293 in suppressing miR-497-
5p expression. These findings collectively
demonstrate that circRNA_104293 targets
and downregulates miR-497-5p.
Si-circRNA_104293 reduced inflammation
LPS-treated cells were divided into
three groups: si-NC + NC-inhibitor, si-cir-
cRNA_104293 + miR-497-5p-inhibitor, and
si-circRNA_104293 + NC-inhibitor, to in-
vestigate the roles of circRNA_104293 and
Fig. 1. Elevated circRNA_104293 expressions in Crohn’s disease (CD) patients and lipopolysaccharide (LPS)-
treated FHC cells. A. Volcano plot showing differentially expressed circRNAs in CD patients and
controls based on log|fold change| > 1 and an FDR-adjusted p-value < 0.05. B. Quantitative (q)
PCR was used to compare the levels of circRNA_104293 in fetal human colon (FHC) cells under diffe-
rent treatments, using Student’s t-test. (**p < 0.01).
The role of CircRNA104293 in Crohn’s disease 371
Vol. 66(4): 365 - 377, 2025
miR-497-5p. The efficacy of the miR-497-5p
inhibitor was confirmed via qPCR, showing
a significant reduction in miR-497-5p levels
(Fig. 4A). Immunofluorescence assays re-
vealed that the miR-497-5p inhibitor partial-
ly reversed the effects of si-circRNA_104293,
markedly decreasing dsDNA and ssDNA
levels (Fig. 4B, C). Furthermore, si-cir-
cRNA_104293 downregulated inflammatory
cytokines, while the miR-497-5p inhibitor
partially counteracted this effect (Fig. 4D).
Apoptosis assays demonstrated that si-cir-
cRNA_104293 reduced apoptosis rates. In
contrast, the miR-497-5p inhibitor increased
them (Fig. 4E). These findings indicate that
circRNA_104293 mitigates inflammation
and apoptosis by regulating miR-497-5p.
CircRNA_104293/miR-497-5p alleviated
inflammation levels
Western blot analysis revealed that both
miR-497-5p mimic and rapamycin down-
regulated the expression of p-mTOR and p-
STAT3 compared to the NC-mimic group,
indicating suppression of the mTOR/STAT3
pathway (Fig. 5A). Immunofluorescence as-
Fig. 2. Si-circRNA_104293 attenuates inflammation in LPS-treated FHC cells. A. Transfection efficiency of
si-circRNA_104293 was confirmed by quantitative (q)PCR. B. ELISA measurements of TNF-α, IL-1β,
IL-6, and IL-8 levels across different groups. C. Flow cytometry analysis of apoptosis in lipopolysac-
charide (LPS)-treated fetal human colon (FHC) cells. (**p < 0.01 vs. si-NC group).
Fig. 3. circRNA_104293 targets miR-497-5p. A. Predicted binding site between circRNA_104293 and miR-497-
5p. B. The dual luciferase assay confirmed the interaction between circRNA_104293 and miR-497-5p.
C. qPCR analysis of miR-497-5p expression in control and lipopolysaccharide (LPS) groups. D. qPCR for
miR-497-5p levels in cells treated with si-NC or si-circRNA_104293. (**p<0.01 vs. control or NC group).
372 Yin et al.
Investigación Clínica 66(4): 2025
says showed reduced levels of ssDNA and ds-
DNA in the miR-497-5p-mimic and rapamy-
cin groups (Fig. 5B, C). Additionally, ELISA
results demonstrated decreased levels of in-
flammatory cytokines in these groups (Fig.
5D). Apoptosis analysis further confirmed
that miR-497-5p mimic and rapamycin sig-
nificantly lowered apoptosis rates compared
to the NC-mimic group (Fig. 5E).
DISCUSSION
CircRNA is more stable than linear
RNA, making it of great value for clini-
cal diagnosis and prognostic evaluation of
CD 17. Recently, some studies have shown
that circRNAs such as circRNA102610, cir-
cRNA103516, and circRNA102685 are in-
volved in the inflammatory process of CD.
However, the role of most circRNAs in CD
pathogenesis remains elusive and there-
fore requires further exploration18,20. cir-
cRNA103765 has been identified as a key
regulator of CD11 pathogenesis. In this
study, significantly increased expression of
circRNA104293 was observed in LPS-treated
FHC cells and in CD patients. These results
suggest a potential role for circRNA104293
in regulating inflammation in CD.
In IBD, TNF-α plays a critical role in
the intestinal mucosa through autocrine
and paracrine mechanisms 21. LPS produced
by the gut microbiota can directly activate
macrophages in the intestinal lamina pro-
Fig. 4. Si-circRNA_104293 reduces inflammation via miR-497-5p. A. qPCR for the miR-497-5p levels in NC-
inhibitor and miR-497-5p inhibitor. (**p < 0.01) B-C. Immunofluorescence analysis for the dsDNA and
ssDNA levels in different treatment groups. (**p <0.01, si-circRNA+NC-inhibitor vs si-NC+NC-inhibi-
tor, ## p <0.01, si-circRNA+miR-497-5p-inhibitor vs si-NC+NC-inhibitor). D. ELISA for the expres-
sion of inflammatory cytokines in different treatment groups. (**p<0.01, si-circRNA + NC-inhibitor vs
si-NC + NC-inhibitor, ## p<0.01, si-circRNA + miR-497-5p-inhibitor vs si-circRNA + NC-inhibitor). E.
Flow cytometry for the cell apoptosis in different groups. (**p<0.01, si-circRNA + NC-inhibitor vs si-NC
+ NC-inhibitor, ## p<0.01, si-circRNA + miR-497-5p-inhibitor vs si-circRNA + NC-inhibitor).
The role of CircRNA104293 in Crohn’s disease 373
Vol. 66(4): 365 - 377, 2025
pria, promote their proliferation, and induce
TNF release 22. It has been shown that TNF-α
and IL-1β expression are significantly abnor-
mal in mucosal biopsies from pediatric CD
patients 23. In addition, the synergistic effect
of TNF-α with interferon γ disrupts barrier
function and alters the morphological struc-
ture of intestinal epithelial cells, resulting in
increased permeability of the intestinal mu-
cosa and vascular wall, ultimately triggering
ulcer formation 24, 25. In the pathogenesis of
CD, inhibition of apoptosis leads to exces-
sive accumulation of T cells, which in turn
aggravates chronic mucosal inflammation, a
process closely related to IL-6 signaling26,27.
Notably, IL-8 expression is abnormal in the
serum and intestinal tissues of immune CD
patients, and its level not only reflects disease
severity but also serves as an independent in-
dicator of disease activity 28. In this study, we
found that si-circRNA104293 significantly re-
duced levels of inflammatory factors.
Fig. 5. circRNA_104293/miR-497-5p alleviates inflammation by inhibiting mTOR/STAT3 pathway. A. Wes-
tern blot analysis of p-mTOR and p-STAT3 expression across different groups. B-C. Immunofluores-
cence analysis of dsDNA and ssDNA levels. (**p<0.01, miR-497-5p-mimic vs NC-mimic, ## p<0.01,
rapamycin vs NC-mimic). D. ELISA measurements of TNF-α, IL-1β, IL-6, and IL-8 levels. E. Flow
cytometry assessment of cell apoptosis in different groups. (**p<0.01 vs. NC-mimic group).
374 Yin et al.
Investigación Clínica 66(4): 2025
In this study, circRNA104293 was found
to play a regulatory role by targeting and in-
hibiting miR-497-5p expression. It has been
shown that miR-497-5p can upregulate IL-6
expression, thereby inhibiting muscle cell
atrophy, and affects the inflammatory pro-
cess by participating in the NF-κB pathway
and regulating T cell function 29. The re-
sults of this work, consistently, shows that
si-circRNA104293 significantly decreased
the rate of apoptosis, whereas the miR-497-
5p inhibitor increased it. In addition, si-cir-
cRNA104293 effectively reduced the inflam-
matory response by regulating miR-497-5p,
indicating that the circRNA104293/miR-
497-5p axis plays a vital role in regulating
inflammation in CD. It was also found that
si-circRNA104293 significantly reduced ds-
DNA and ssDNA levels, while miR-497-5p in-
hibitors partially reversed this effect, further
confirming the key role of circRNA104293 in
inflammation and cell damage.
In this study, we found that p-mTOR
and p-STAT3 expression levels were signifi-
cantly decreased in miR-497-5p mimic and
rapamycin groups compared with NC mimic
groups 30. Previous studies have shown that
p-mTOR levels are increased in colonic tis-
sue of CD patients. mTOR, a key molecule
regulating cellular energy metabolism, mi-
tochondrial fusion, and glucose and lipid
metabolism, has inhibitors that can effec-
tively suppress the expression of inflamma-
tory factors 31. In addition, STAT3 acts as a
multifunctional transcription factor and can
activate inflammatory responses in T cells
through IL-6-mediated JAK/STAT3 signaling
pathway32. Blocking IL-6 signaling not only
reduces STAT3 activation but also induces
monocyte apoptosis, thereby relieving coli-
tis triggered by IL-10 deficiency 33, 34. In CD
patients, total STAT3 and phosphorylated
STAT3 levels were significantly increased in
inflammatory intestinal mucosa, and phos-
phorylated STAT3 levels were positively cor-
related with the degree of inflammatory
injury 35. The results of this study further
confirmed that circRNA104293/miR-497-5p
significantly reduced CD inflammatory lev-
els by inhibiting the mTOR/STAT3 pathway.
In summary, our findings suggest that the
circRNA_104293/miR-497-5p axis regulates
LPS-induced inflammatory responses by mod-
ulating the mTOR/STAT3 signaling pathway.
These results indicate its potential as a thera-
peutic target in inflammatory processes.
Funding
Chengdu Medical Scientific Research
Project (2021333).
Conflict of interest
The authors declare that they have no
conflict of interest regarding this study.
Ethics approval and consent to participate
This study was conducted in accordance
with the Declaration of Helsinki, and was con-
ducted with approval from the Ethics Commit-
tee of The First People’s Hospital of Shuangliu
District/West China (Airport) Hospital, Sich-
uan University. Written informed consent was
obtained from all participants.
ORCID number of authors
Xuerui Yin (XY):
0009-0006-6698-8009
Gaigai Huang (GH):
0009-0008-4424-1179
Chuan Zheng (CZ):
0009-0005-4178-415X
Yu Zhou (YZ):
0009-0007-4611-3069
Rong Chen (RC):
0009-0005-7624-8285
Author contributions
Conceived and designed the study: XY,
RC, GH; performed the literature search and
data extraction: XY, CZ, YZ; analyzed the
data: RC; drafted the manuscript: XY, RC
The role of CircRNA104293 in Crohn’s disease 375
Vol. 66(4): 365 - 377, 2025
REFERENCES
1. Vanhove W, Nys K, Vermeire S. Therapeu-
tic innovations in inflammatory bowel dis-
eases. Clin Pharmacol Ther. 2016; 99(1):
49-58. https://doi.org/10.1002/cpt.286.
2. Lomer MC, Thompson RP, Powell JJ. Fine
and ultrafine particles of the diet: influ-
ence on the mucosal immune response
and association with Crohn’s disease. Proc
Nutr Soc. 2002; 61(1): 123-130. https://
doi.org/10.1079/pns2001134.
3. Zhao J, Wang H, Yang H, Zhou Y, Tang L.
Autophagy induction by rapamycin ame-
liorates experimental colitis and improves
intestinal epithelial barrier function in
IL-10 knockout mice. Int Immunophar-
macol. 2020; 81: 105977. https://doi.
org/10.1016/j.intimp.2019.105977.
4. Long SH, He Y, Chen MH, Cao K, Chen
YJ, Chen BL, et al. Activation of PI3K/
Akt/mTOR signaling pathway triggered by
PTEN downregulation in the pathogenesis
of Crohn’s disease. J Dig Dis. 2013; 14(12):
662-669. https://doi.org/10.1111/1751-
2980.12095.
5. Li L, Wan G, Han B, Zhang Z. Echinaco-
side alleviated LPS-induced cell apoptosis
and inflammation in rat intestine epithe-
lial cells by inhibiting the mTOR/STAT3
pathway. Biomed Pharmacother. 2018;
104: 622-628. https://doi.org/10.1016/j.
biopha.2018.05.072.
6. Li F, Yin YK, Zhang JT, Gong HP, Hao XD.
Role of circular RNAs in retinoblastoma.
Funct Integr Genomics. 2022; 23(1): 13.
https://doi.org/10.1007/s10142-022-
00942-9.
7. Li L, Zhang Q and Lian K. Circular RNA
circ_0000284 plays an oncogenic role
in the progression of non-small cell lung
cancer through the miR-377-3p-mediated
PD-L1 promotion. Cancer Cell Int. 2020;
20: 247. https://doi.org/10.1186/s12935-
020-01310-y.
8. Zhang M, Han Y, Zhai Y, Ma X, An X,
Zhang S, et al. Integrative analysis of cir-
cRNAs, miRNAs, and mRNAs profiles to
reveal ceRNAs networks in chicken intra-
muscular and abdominal adipogenesis.
BMC Genomics. 2020; 21(1): 594. https://
doi.org/10.1186/s12864-020-07000-3.
9. Pan H, Li T, Jiang Y, Pan C, Ding Y, Huang
Z, et al. Overexpression of Circular RNA
ciRS-7 Abrogates the Tumor Suppres-
sive Effect of miR-7 on Gastric Cancer via
PTEN/PI3K/AKT Signaling Pathway. J Cell
Biochem. 2018; 119(1): 440-446. https://
doi.org/10.1002/jcb.26201.
10. Zhang Y, Li C, Liu X, Wang Y, Zhao R,
Yang Y, et al. circHIPK3 promotes oxalipla-
tin-resistance in colorectal cancer through
autophagy by sponging miR-637. EBio-
Medicine. 2019; 48: 277-288. https://doi.
org/10.1016/j.ebiom.2019.09.051.
11. Ye Y, Zhang L, Hu T, Yin J, Xu L, Pang Z,
et al. CircRNA_103765 acts as a proinflam-
matory factor via sponging miR-30 family
in Crohn’s disease. Sci Rep. 2021; 11(1):
565. https://doi.org/10.1038/s41598-020-
80663-w.
12. Wu F, Guo NJ, Tian H, Marohn M, Gear-
hart S, Bayless TM, et al. Peripheral blood
microRNAs distinguish active ulcerative
colitis and Crohn’s disease. Inflamm Bow-
el Dis. 2011; 17(1): 241-250. https://doi.
org/10.1002/ibd.21450.
13. Syed NH, Mussa A, Elmi AH, Jamal Al-
Khreisat M, Ahmad Mohd Zain MR, Nurul
AA. Role of MicroRNAs in Inflammatory
Joint Diseases: A Review. Immunol Invest.
2024; 53(2): 185-209. https://doi.org/10.
1080/08820139.2023.2293095.
14. Ke J, Chen M, Ma S, Zhang L, Zhang L.
Circular RNA VMA21 ameliorates lung
injury in septic rat via targeting microR-
NA-497-5p/CD2-associated protein axis.
Bioengineered. 2022; 13(3): 5453-5466.
https://doi.org/10.1080/21655979.2022.
2031406.
15. Lou W, Yan J, Wang W. Downregulation
of miR-497-5p Improves Sepsis-Induced
Acute Lung Injury by Targeting IL2RB.
Biomed Res Int. 2021; 2021: 6624702.
https://doi.org/10.1155/2021/6624702.
16. Zhang M, Yang D, Yu H, Li Q. MicroR-
NA-497 inhibits inflammation in DSS-
induced IBD model mice and lipopoly-
saccharide-induced RAW264.7 cells via
Wnt/β-catenin pathway. Int Immunophar-
376 Yin et al.
Investigación Clínica 66(4): 2025
macol. 2021; 101(Pt B): 108318. https://
doi.org/10.1016/j.intimp.2021.108318.
17. Ma YS, Cao YF, Liu JB, Li W, Deng J, Yang
XL, et al. The power and the promise of
circRNAs for cancer precision medicine
with functional diagnostics and prognostic
prediction. Carcinogenesis. 2021; 42(11):
1305-1313. https://doi.org/10.1093/car-
cin/bgab071.
18. Yin J, Hu T, Xu L, Li P, Li M, Ye Y, et al. Cir-
cular RNA expression profile in peripheral
blood mononuclear cells from Crohn dis-
ease patients. Medicine (Baltimore). 2019;
98(26): e16072. https://doi.org/10.1097/
md.0000000000016072.
19. Lu JW, Rouzigu A, Teng LH, Liu WL.
The Construction and Comprehensive
Analysis of Inflammation-Related ceRNA
Networks and Tissue-Infiltrating Immune
Cells in Ulcerative Progression. Biomed
Res Int. 2021; 2021: 6633442. https://doi.
org/10.1155/2021/6633442.
20. Qiao YQ, Cai CW, Shen J, Zheng Q, Ran
ZH. Circular RNA expression alterations
in colon tissues of Crohn’s disease pa-
tients. Mol Med Rep. 2019; 19(5): 4500-
4506. https://doi.org/10.3892/mmr.2019.
10070.
21. Zhu Y, Mahon BD, Froicu M, Cantorna
MT. Calcium and 1 alpha,25-dihydroxyvi-
tamin D3 target the TNF-alpha pathway
to suppress experimental inflammatory
bowel disease. Eur J Immunol. 2005;
35(1): 217-224. https://doi.org/10.1002/
eji.200425491.
22. Sun L, Rollins D, Qi Y, Fredericks J,
Mansell TJ, Jergens A, et al. TNFα reg-
ulates intestinal organoids from mice
with both defined and conventional mi-
crobiota. Int J Biol Macromol. 2020;
164: 548-556. https://doi.org/10.1016/j.
ijbiomac.2020.07.176.
23. Kaminsky LW, Al-Sadi R, Ma TY. IL-1β
and the Intestinal Epithelial Tight Junc-
tion Barrier. Front Immunol. 2021; 12:
767456. https://doi.org/10.3389/fim-
mu.2021.767456.
24. Van Winkle JA, Constant DA, Li L, Nice
TJ. Selective Interferon Responses of In-
testinal Epithelial Cells Minimize Tumor
Necrosis Factor Alpha Cytotoxicity. J Vi-
rol. 2020; 94(21): e00603-20. https://doi.
org/10.1128/jvi.00603-20.
25. Coope A, Pascoal LB, da Silva FAR,
Botezelli JD, Ayrizono MLS, Milanski M, et
al. Transcriptional and Molecular Pathways
Activated in Mesenteric Adipose Tissue and
Intestinal Mucosa of Crohn’s Disease Pa-
tients. Int J Inflam. 2017; 2017: 7646859.
https://doi.org/10.1155/2017/7646859.
26. Nakano K, Yamaoka K, Hanami K, Saito K,
Sasaguri Y, Yanagihara N, et al. Dopamine
induces IL-6-dependent IL-17 production
via D1-like receptor on CD4 naive T cells
and D1-like receptor antagonist SCH-
23390 inhibits cartilage destruction in a
human rheumatoid arthritis/SCID mouse
chimera model. J Immunol. 2011; 186(6):
3745-3752. https://doi.org/10.4049/jim-
munol.1002475.
27. García de Tena J, Manzano L, Leal JC,
San Antonio E, Sualdea V, Alvarez-Mon M.
Distinctive pattern of cytokine production
and adhesion molecule expression in pe-
ripheral blood memory CD4+ T cells from
patients with active Crohn’s disease. J Clin
Immunol. 2006; 26(3): 233-242. https://
doi.org/10.1007/s10875-006-9016-4.
28. Jones SC, Evans SW, Lobo AJ, Ceska M,
Axon AT, Whicher JT. Serum interleukin-8
in inflammatory bowel disease. J Gastroen-
terol Hepatol. 1993; 8(6): 508-512. https://
doi.org/10.1111/j.1440-1746.1993.
tb01643.x.
29. Freire PP, Cury SS, Lopes LO, Fernandez
GJ, Liu J, de Moraes LN, et al. Decreased
miR-497-5p Suppresses IL-6 Induced
Atrophy in Muscle Cells. Cells. 2021;
10(12):3527. https://doi.org/10.3390/
cells10123527.
30. Brandt M, Grazioso TP, Fawal MA, Tum-
mala KS, Torres-Ruiz R, Rodriguez-Pe-
rales S, et al. mTORC1 Inactivation Pro-
motes Colitis-Induced Colorectal Cancer
but Protects from APC Loss-Dependent
Tumorigenesis. Cell Metab. 2018. 27(1):
118-135.e8. https://doi.org/10.1016/j.
cmet.2017.11.006.
31. Zhang D, Liu J, Lv L, Chen X, Qian Y,
Zhao P, et al. Total flavone of Abelmoschus
The role of CircRNA104293 in Crohn’s disease 377
Vol. 66(4): 365 - 377, 2025
manihot regulates autophagy through the
AMPK/mTOR signaling pathway to treat
intestinal fibrosis in Crohn’s disease. J
Gastroenterol Hepatol. 2024; 39(8): 1586-
1596. https://doi.org/10.1111/jgh.16560.
32. Wang Y, Liu H, Zhang Z, Bian D, Shao K,
Wang S, et al. G-MDSC-derived exosomes
mediate the differentiation of M-MDSC
into M2 macrophages promoting colitis-
to-cancer transition. J Immunother Can-
cer. 2023; 11(6): e006166.https://doi.
org/10.1136/jitc-2022-006166.
33. Gyamfi J, Lee YH, Eom M, Choi J. Inter-
leukin-6/STAT3 signalling regulates adipo-
cyte induced epithelial-mesenchymal tran-
sition in breast cancer cells. Sci Rep. 2018;
8(1): 8859. https://doi.org/10.1038/
s41598-018-27184-9.
34. Akanda MR, Nam HH, Tian W, Islam A,
Choo BK, Park BY. Regulation of JAK2/
STAT3 and NF-κB signal transduction
pathways; Veronica polita alleviates dex-
tran sulfate sodium-induced murine coli-
tis. Biomed Pharmacother. 2018; 100:
296-303. https://doi.org/10.1016/j.bio-
pha.2018.01.168.
35. Kaur S, Bansal Y, Kumar R, Bansal G. A
panoramic review of IL-6: Structure, patho-
physiological roles and inhibitors. Bioorg
Med Chem. 2020; 28(5): 115327. https://
doi.org/10.1016/j.bmc.2020.115327.