
Lactic acid bacteria in traditional cheeses / Kalkan et al._______________________________________________________________________________
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INTRODUCTION
Cheese is a food product with high nutritional value, obtained 
by pre–treating milk and usually fermenting it, and consumed 
with pleasure all over the world. In addition, cheese is one of 
the oldest fermented food products made by human [1]. France, 
Netherlands, and Italy were famous for cheeses. Also, Turkey is 
a very rich country in terms of cheese diversity [2]. Nowadays, 
4,000 different variety of cheese are present in the world. Turkey 
manufactures approximately 200 variety of cheese [3]. Although 
the production methods of these cheese varieties are similar to 
each other, their chemical, physical and sensory properties vary 
depending on the milk, microflora or starter culture, environmental 
factors such as climate and region. The Black Sea Region is one of 
the regions of Turkey with rich cheese varieties. More than 30 types 
of cheese are manufactured in this region. The most well–known 
cheese types in the Black Sea Region are Civil Cheese, Kargi Tulum 
Cheese, Imansiz Cheese, Kurchi Cheese, Minzi Cheese and Kolot 
Cheese [4]. Kargı Tulum Cheese is a traditional cheese originating 
from the Kargı district in Çorum province, Turkey. It is crafted using 
a variety of milks, such as cow, sheep, or buffalo milk, depending 
on local availability and preferences. It is typically made from 
milk collected during the autumn season, which contributes to 
its rich, high–fat content. Telli cheese is a traditional cheese from 
the central districts of Trabzon and Artvin, as well as the Sürmene 
and Akçaabat administrative districts of Trabzon in Turkey. It is 
made primarily from cow’s milk. Telli cheese has thicker threads 
compared to the thinner threads of Civil Cheese, which is also 
sourer and salt–free in flavor. Artvin Şor cheese is made in the 
Savsat district of Artvin and its vicinity. Its name derives from the 
word Şor which means “bitter” in the region. This cheese is of a 
dark yellow color, is very salty and has a bitter taste [4].
In recent years, due to the increasing demand of consumers 
for natural products, interest in local cheese varieties has 
increased [5]. It is possible that local cheese varieties will be 
produced industrially and delivered much more and subsequently 
become a demanded product in the world market [6]. However, 
cheese industrially produced with starter cultures is different 
from traditional cheese with spontaneous lactic microflora 
(i.e. nonstarter lactic acid bacteria) regarding sensory quality 
properties. Starter lactic acid bacteria (LAB) are deliberately added 
to the milk for the production of acid during cheese processing. 
However, nonstarter lactic acid bacteria or indigenous microflora 
are inherently present in raw milk and play an important role in 
the developing of cheese flavor [3, 7].
The presence of numerous enzymes and indigenous lactic acid 
bacteria in milk improves quality properties of traditional cheeses. 
Native LAB develop texture and flavour properties of cheeses with 
microbiological and biochemical changes [7]. In industrial cheese 
production, the main lactic acid bacteria utilized as starter cultures 
are Lactobacilus casei, Lactobacillus helveticus and Lactobacillus 
delbrueckii subsp. bulgaricus [8]. In order to produce traditional 
cheese industrially, it is essential to determine the microflora of 
the local cheese. Additionally, the characterization of the dominant 
microflora provides whether it is possible to use as a starter culture 
[9]. Recently, molecular methods have been utilized to identify 
lactic acid bacteria. Especially, the sequences of the gene 16S 
of the ribosomal RNA is highly effective method to describe the 
phylogenetic degree of relatedness among bacteria. Hence, 16S 
rRNA sequence analysis has been progressively performed to 
characterize the bacterial diversity of various cheeses [10].
The dairy industry works with the limited variety of starter 
cultures. However, there is a need for indigenous LAB strains as 
starters to produce more flavorful cheeses [11]. A few studies 
have reported to determine indigenous lactic acid bacteria in the 
traditional cheese of the black sea region. This research aims to 
identify lactic acid bacteria in the traditional cheese of the black 
sea region by using PCR based molecular techniques.
MATERIALS AND METHODS
Cheese samples
Cheese samples were obtained from Black Sea Region in Turkey. 
Traditional Turkish cheeses of Black Sea Region used in this study 
are Telli cheese (TP) from Tonya/Trabzon, Şor cheese (AŞ) from 
Artvin, Tecen cheese (TC) from Giresun, Kargı Tulum cheese (KT) 
from Kargı/Çorum and Kesik cheese (OK) from Ordu.
Isolation and enumeration of lactic acid bacteria in traditional 
cheeses
Cheese sample (25 g) was diluted with 225 mL of peptone 
water (Sigma) and then homogenized with stomacher for 2 min 
at 10 strokes per second. Serial dilution method is used for the 
enumeration of lactic acid bacteria. Using a 1/10 dilution rate, the 
homogenate was diluted to a dilution level of 10
7
. By taking 0.1 mL 
from the appropriate dilutions, the homogenate was cultivated in 
petri dishes containing the selective medium. The two selective 
media were utilized for enumeration and isolation of bacteria. LAB 
with mainly lactococci are grown on M17 agar acc. to TERZAGHI 
(M17 Agar, Merck, Germany) at 30°C for 48–72 h under anaerobic 
conditions; LAB with mainly lactobacilli are grown on de MAN, 
ROGOSA and SHARPE (MRS) Agar (Merck, Germany) at 37°C for 
48–72 h under anaerobic conditions. For anaerobic conditions, 
anaerobic jars and anaerocult A were applied. Following incubation, 
the colonies grown on M17 and MRS plates were enumerated. 
From each cheese sample, approx. Ten colonies with distinct 
morphological characteristics were selected from MRS and M17 
agar plates and subsequently transferred to fresh plates for further 
purication. The assessment of Gram–positive and catalase–
negative colonies was performed in a medium containing 6.5% 
and 18% NaCl and at temperatures of 10 and 45°C, at pH 4.4 
and pH 9.6. Furthermore, CO
2
 production as a result of glucose 
metabolism of the isolates and arrangement of cells (tetrad form, 
chain form) was assessed. Gram–positive and catalase negative 
pure isolates were selected from all cheese samples, and they were 
stored at -20°C (Arçelik, 4252EY, Türkiye) with glycerol (Merck, 
Darmstadt, Germany) stocks [7, 12, 13].
Extraction of bacterial DNA from pure isolates of cheese samples
Bacterial DNA from pure isolates was extracted using method 
described in previous studies [7, 14, 15]. 2 mL overnight culture were 
obtained for total DNA extraction. Microbial cells were centrifugated 
(Hermle Z326K, Germany) for 5 min at 4,000 g at 4°C. Supernatant 
was poured and then the pellets were resuspended in 500 μL of the 
lysis buffer. After incubation (Nuve ES 120 cooled incubator, Türkiye) 
for 10 min at 65°C, 150 μL potassium acetate was added. The mixture